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Component organizations: Gump South Pacific Research Station, Museum of Vertebrate Zoology, Pacific Earthquake Engineering Research Center, Plant Gene Expression Center, Space Sciences Laboratory
Joint organizations: Center for Effective Global Action, Chan Zuckerberg Biohub San Francisco, Innovative Genomics Institute, QB3, Tsinghua–Berkeley Shenzhen Institute
Associated organizations: Graduate Theological Union, Hubbard Brook Long Term Ecological Research, Kaiser Permanente Oakland Medical Center, Moorea Coral Reef Long Term Ecological Research, San Francisco Theological Seminary